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    yigZ IMPACT family member YigZ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948334, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yigZ
    Official Full Name
    IMPACT family member YigZ
    Primary source
    ECOCYC:EG11484
    Locus tag
    b3848
    See related
    ASAP:ABE-0012571
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3840
    Summary
    yigZ is a widely conserved gene; its mammalian homolog is the imprinted (paternally expressed) mouse gene impact . [More information is available at EcoCyc: EG11484].
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    Genomic context

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    Sequence:
    NC_000913.3 (4032492..4033106)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA thiolase Neighboring gene multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Delta(3)-cis- Delta(2)-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase Neighboring gene Xaa-Pro dipeptidase Neighboring gene K(+) transporter TrkH Neighboring gene protoporphyrinogen oxidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast chromosome III: new gene functions. Koonin EV, et al. EMBO J, 1994 Feb 1. PMID 8313894, Free PMC Article
    2. Screening for imprinted genes by allelic message display: identification of a paternally expressed gene impact on mouse chromosome 18. Hagiwara Y, et al. Proc Natl Acad Sci U S A, 1997 Aug 19. PMID 9256468, Free PMC Article
    3. Nucleotide sequence between the fadB gene and the rrnA operon from Escherichia coli. Nakahigashi K, et al. Nucleic Acids Res, 1990 Nov 11. PMID 2243799, Free PMC Article
    4. Structural analysis of a set of proteins resulting from a bacterial genomics project. Badger J, et al. Proteins, 2005 Sep 1. PMID 16021622
    5. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables anion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables guanyl ribonucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables ribonucleoside triphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of translational initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    IMPACT family member YigZ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4032492..4033106
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418290.4 IMPACT family member YigZ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418290.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3JA74
      Conserved Domains (1) summary
      PRK11568
      Location:1 → 204
      PRK11568; IMPACT family protein
    Nucleotide Protein
    Heading Accession and Version

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