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    sfmH putative fimbrial adhesin protein SfmH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945407, updated on 17-Dec-2024

    Summary

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    Official Symbol
    sfmH
    Official Full Name
    putative fimbrial adhesin protein SfmH
    Primary source
    ECOCYC:G6293
    Locus tag
    b0533
    See related
    ASAP:ABE-0001832
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0526
    Summary
    One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG13884]. sfmH was shown using in vivo-induced antigen technology to be specifically expressed during human infection in Escherichia coli O157:H7 EDL933 . [More information is available at EcoCyc: G6293].
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    Genomic context

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    Sequence:
    NC_000913.3 (562336..563319)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial chaperone SfmC Neighboring gene putative fimbrial usher protein SfmD Neighboring gene putative fimbrial protein SfmF Neighboring gene putative LuxR family transcriptional regulator FimZ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Use of in vivo-induced antigen technology for identification of Escherichia coli O157:H7 proteins expressed during human infection. John M, et al. Infect Immun, 2005 May. PMID 15845468, Free PMC Article
    2. FimH forms catch bonds that are enhanced by mechanical force due to allosteric regulation. Yakovenko O, et al. J Biol Chem, 2008 Apr 25. PMID 18292092, Free PMC Article
    3. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
    4. Generating tetracycline-inducible auxotrophy in Escherichia coli and Salmonella enterica serovar Typhimurium by using an insertion element and a hyperactive transposase. Köstner M, et al. Appl Environ Microbiol, 2006 Jul. PMID 16820464, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell adhesion involved in single-species biofilm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in pilus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial adhesin protein SfmH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      562336..563319
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415066.2 putative fimbrial adhesin protein SfmH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415066.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H3JCH5, A0AAV3HGA8, C3TKI2
      Conserved Domains (1) summary
      PRK15199
      Location:2 → 327
      fimH; type 1 fimbrin D-mannose specific adhesin FimH
    Nucleotide Protein
    Heading Accession and Version

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