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    ybhJ putative hydratase YbhJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945380, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ybhJ
    Official Full Name
    putative hydratase YbhJ
    Primary source
    ECOCYC:G6401
    Locus tag
    b0771
    See related
    ASAP:ABE-0002626
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0760
    Summary
    AFMB Structural Genomics target Number 96 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG13666]. YbhJ has similarity to AcnA but does not appear to exhibit any aconitase activity . [More information is available at EcoCyc: G6401].
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    Genomic context

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    Sequence:
    NC_000913.3 (803503..805764)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative isomerase YbhH Neighboring gene putative tricarboxylate transporter Neighboring gene outer membrane lipoprotein YbhC Neighboring gene putative kinase inhibitor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AcnC of Escherichia coli is a 2-methylcitrate dehydratase (PrpD) that can use citrate and isocitrate as substrates. Blank L, et al. Microbiology (Reading), 2002 Jan. PMID 11782506
    2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    3. Inferring gene function from evolutionary change in signatures of translation efficiency. Krisko A, et al. Genome Biol, 2014 Mar 3. PMID 24580753, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables aconitate hydratase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative hydratase YbhJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      803503..805764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415292.2 putative hydratase YbhJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415292.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FQG3, A0A775YVV0
      Conserved Domains (1) summary
      PRK11413
      Location:1 → 751
      PRK11413; putative hydratase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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