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    yccT DUF2057 domain-containing protein YccT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945577, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yccT
    Official Full Name
    DUF2057 domain-containing protein YccT
    Primary source
    ECOCYC:G6498
    Locus tag
    b0964
    See related
    ASAP:ABE-0003262
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0955
    Summary
    YccT shows a low sequence similarity with OmpH from Photobacterium SS9 . [More information is available at EcoCyc: G6498].
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    Genomic context

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    Sequence:
    NC_000913.3 (1027111..1027773, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA helicase IV Neighboring gene methylglyoxal synthase Neighboring gene putative HspQ acetyl donor Neighboring gene heat shock protein HspQ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multicopy suppression underpins metabolic evolvability. Patrick WM, et al. Mol Biol Evol, 2007 Dec. PMID 17884825, Free PMC Article
    2. CsgI (YccT) Is a Novel Inhibitor of Curli Fimbriae Formation in Escherichia coli Preventing CsgA Polymerization and Curli Gene Expression. Sano K, et al. Int J Mol Sci, 2023 Feb 22. PMID 36901788, Free PMC Article
    3. Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae. Kolker E, et al. Nucleic Acids Res, 2004. PMID 15121896, Free PMC Article
    4. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF2057 domain-containing protein YccT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1027111..1027773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415484.1 DUF2057 domain-containing protein YccT [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415484.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2W6PEZ5, A0A376MB09
      Conserved Domains (1) summary
      PRK03641
      Location:1 → 220
      PRK03641; DUF2057 family protein
    Nucleotide Protein
    Heading Accession and Version

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