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    cspH CspA family protein CspH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945590, updated on 3-Dec-2024

    Summary

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    Official Symbol
    cspH
    Official Full Name
    CspA family protein CspH
    Primary source
    ECOCYC:G6510
    Locus tag
    b0989
    See related
    ASAP:ABE-0003341
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    cspK; ECK0979
    Summary
    CspH was identified as a member of the CspA family of proteins; it is most closely related to CspF, and its function is unknown . [More information is available at EcoCyc: G6510].
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    Genomic context

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    Sequence:
    NC_000913.3 (1050963..1051175, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene threonine-rich inner membrane protein GfcA Neighboring gene IS1 family protein InsA Neighboring gene IS1 family protein InsB Neighboring gene cold shock protein CspG Neighboring gene protein YmcF Neighboring gene protein YmcE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CspA family in Escherichia coli: multiple gene duplication for stress adaptation. Yamanaka K, et al. Mol Microbiol, 1998 Jan. PMID 9484881
    2. Applications of nucleic acid chaperone activity of CspA and its homologues. Phadtare S, et al. J Mol Microbiol Biotechnol, 2009. PMID 19556744
    3. Cold shock proteins aid coupling of transcription and translation in bacteria. El-Sharoud WM, et al. Sci Prog, 2007. PMID 17455763, Free PMC Article
    4. Folding chromosomes in bacteria: examining the role of Csp proteins and other small nucleic acid-binding proteins. Trun N, et al. Curr Top Dev Biol, 2003. PMID 12959196
    5. Comparative genomics and evolution of proteins involved in RNA metabolism. Anantharaman V, et al. Nucleic Acids Res, 2002 Apr 1. PMID 11917006, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CspA family protein CspH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1050963..1051175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415509.1 CspA family protein CspH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415509.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1WNS5
      Conserved Domains (1) summary
      cl09927
      Location:1 → 70
      S1_like; Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains ...
    Nucleotide Protein
    Heading Accession and Version

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