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    ydhU putative cytochrome YdhU [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945608, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ydhU
    Official Full Name
    putative cytochrome YdhU
    Primary source
    ECOCYC:G6898
    Locus tag
    b1670
    See related
    ASAP:ABE-0005579
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1666
    Summary
    YdhU is a predicted cytochrome b-containing integral membrane protein. [More information is available at EcoCyc: G6898].
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    Genomic context

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    Sequence:
    NC_000913.3 (1749563..1750348, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene FAD/NAD(P) binding domain-containing protein YdhS Neighboring gene uncharacterized protein YdhT Neighboring gene putative 4Fe-4S ferredoxin-like protein YdhX Neighboring gene uncharacterized protein YdhW Neighboring gene putative oxidoreductase YdhV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. Partridge JD, et al. Microbiology (Reading), 2008 Feb. PMID 18227264
    2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in respiratory electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative cytochrome YdhU

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1749563..1750348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416185.1 putative cytochrome YdhU [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416185.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A776LNS6
      Conserved Domains (1) summary
      PRK15006
      Location:1 → 261
      PRK15006; thiosulfate reductase cytochrome B subunit; Provisional
    Nucleotide Protein
    Heading Accession and Version

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