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    ydjX DedA family protein YdjX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946250, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydjX
    Official Full Name
    DedA family protein YdjX
    Primary source
    ECOCYC:G6945
    Locus tag
    b1750
    See related
    ASAP:ABE-0005832
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1748
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    Genomic context

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    Sequence:
    NC_000913.3 (1833401..1834111)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene arginine N-succinyltransferase Neighboring gene succinylornithine transaminase Neighboring gene exodeoxyribonuclease III Neighboring gene 4Fe-4S ferredoxin-type domain-containing protein YdjY Neighboring gene DedA family protein YdjZ Neighboring gene AhpD-like domain-containing protein YnjA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function. Kang Y, et al. J Bacteriol, 2005 Feb. PMID 15659690, Free PMC Article
    2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    3. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
    4. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article
    5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DedA family protein YdjX

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1833401..1834111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416264.4 DedA family protein YdjX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416264.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6BT12
      Conserved Domains (1) summary
      COG0398
      Location:1 → 221
      TVP38; Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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