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    ynjD putative ABC transporter ATP-binding protein YnjD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944965, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ynjD
    Official Full Name
    putative ABC transporter ATP-binding protein YnjD
    Primary source
    ECOCYC:G6951
    Locus tag
    b1756
    See related
    ASAP:ABE-0005845
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1754
    Summary
    YnjD is an ATP-binding component of a predicted metabolite uptake ABC transporter. [More information is available at EcoCyc: G6951].
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    Genomic context

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    Sequence:
    NC_000913.3 (1838747..1839400)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DedA family protein YdjZ Neighboring gene AhpD-like domain-containing protein YnjA Neighboring gene putative ABC transporter periplasmic binding protein YnjB Neighboring gene putative ABC transporter membrane subunit YnjC Neighboring gene molybdopterin synthase sulfurtransferase Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnjF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ATP-binding cassette transporters in Escherichia coli. Moussatova A, et al. Biochim Biophys Acta, 2008 Sep. PMID 18634750
    2. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292
    3. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    4. The Transporter Classification Database (TCDB): recent advances. Saier MH Jr, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26546518, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex IC
    Inferred by Curator
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative ABC transporter ATP-binding protein YnjD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1838747..1839400
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416270.1 putative ABC transporter ATP-binding protein YnjD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416270.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GJX1
      Conserved Domains (1) summary
      COG4136
      Location:1 → 212
      YnjD; ABC-type uncharacterized transport system YnjBCD, ATPase component [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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