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    yeiR zinc-binding GTPase YeiR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946701, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yeiR
    Official Full Name
    zinc-binding GTPase YeiR
    Primary source
    ECOCYC:EG12104
    Locus tag
    b2173
    See related
    ASAP:ABE-0007194
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2167
    Summary
    CobW homolog. [More information is available at EcoGene: EG12104].
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    Genomic context

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    Sequence:
    NC_000913.3 (2267829..2268815)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene elongation factor P-like protein YeiP Neighboring gene putative oxidoreductase YeiQ Neighboring gene lipid A-core phosphotransferase Neighboring gene peptidoglycan endopeptidase/peptidoglycan L,D-carboxypeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Segmentally variable genes: a new perspective on adaptation. Zheng Y, et al. PLoS Biol, 2004 Apr. PMID 15094797, Free PMC Article
    2. A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life. Haas CE, et al. BMC Genomics, 2009 Oct 12. PMID 19822009, Free PMC Article
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables membrane scission GTPase motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    zinc-binding GTPase YeiR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2267829..2268815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416678.1 zinc-binding GTPase YeiR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416678.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A895NJW2
      Conserved Domains (1) summary
      COG0523
      Location:2 → 328
      YejR; GTPase, G3E family [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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