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    xdhB putative xanthine dehydrogenase FAD-binding subunit XdhB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947205, updated on 17-Dec-2024

    Summary

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    Official Symbol
    xdhB
    Official Full Name
    putative xanthine dehydrogenase FAD-binding subunit XdhB
    Primary source
    ECOCYC:G7486
    Locus tag
    b2867
    See related
    ASAP:ABE-0009416
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2863; ygeT
    Summary
    XdhB has similarity to YagS . [More information is available at EcoCyc: G7486].
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    Genomic context

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    Sequence:
    NC_000913.3 (3002614..3003492)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene amidase activator Neighboring gene putative xanthine dehydrogenase molybdenum-binding subunit XdhA Neighboring gene putative xanthine dehydrogenase iron-sulfur-binding subunit XdhC Neighboring gene putative sigma(54)-dependent transcriptional regulator YgeV Neighboring gene putative carbamoyltransferase YgeW

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molybdenum enzymes, their maturation and molybdenum cofactor biosynthesis in Escherichia coli. Iobbi-Nivol C, et al. Biochim Biophys Acta, 2013 Aug-Sep. PMID 23201473
    2. Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage. Xi H, et al. J Bacteriol, 2000 Oct. PMID 10986234, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables xanthine dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in hypoxanthine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within hypoxanthine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in hypoxanthine catabolic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in purine nucleobase metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in purine ribonucleoside salvage IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in purine ribonucleoside salvage NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    part_of xanthine dehydrogenase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of xanthine dehydrogenase complex NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative xanthine dehydrogenase FAD-binding subunit XdhB
    NP_417343.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3002614..3003492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417343.1 putative xanthine dehydrogenase FAD-binding subunit XdhB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417343.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN3NSR0
      Conserved Domains (1) summary
      PRK09971
      Location:1 → 291
      PRK09971; xanthine dehydrogenase subunit XdhB; Provisional
    Nucleotide Protein
    Heading Accession and Version

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