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    yhfS putative aminotransferase YhfS [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947884, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yhfS
    Official Full Name
    putative aminotransferase YhfS
    Primary source
    ECOCYC:G7728
    Locus tag
    b3376
    See related
    ASAP:ABE-0011035
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3363
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    Genomic context

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    Sequence:
    NC_000913.3 (3504935..3506020, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene fructoselysine 3-epimerase Neighboring gene fructoselysine 6-kinase Neighboring gene DNA-binding transcriptional regulator FrlR Neighboring gene uncharacterized protein YhfT Neighboring gene DUF2620 domain-containing protein YhfU

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR. Salmon K, et al. J Biol Chem, 2003 Aug 8. PMID 12754220
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cysteine synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity, transferring alkyl or aryl (other than methyl) groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 'de novo' L-methionine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in L-homocysteine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cysteine biosynthetic process from serine IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative aminotransferase YhfS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3504935..3506020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417835.1 putative aminotransferase YhfS [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417835.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A830SFY3
      Conserved Domains (1) summary
      cl18945
      Location:75 → 239
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    Nucleotide Protein
    Heading Accession and Version

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