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    yhhI putative transposase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947992, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yhhI
    Official Full Name
    putative transposase
    Primary source
    ECOCYC:EG11525
    Locus tag
    b3484
    See related
    ASAP:ABE-0011377
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3469
    Summary
    Full length paralogs YhhI and YdcC are putative transposases. [More information is available at EcoGene: EG11525].
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    Genomic context

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    Sequence:
    NC_000913.3 (3624378..3625514)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene rhs element protein RhsB Neighboring gene PF15631 family protein YhhH Neighboring gene pseudo Neighboring gene ABC transporter family protein YhhJ Neighboring gene ribosome-associated ATPase Neighboring gene putative membrane fusion protein YhiI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement. Jackson AP, et al. BMC Genomics, 2009 Dec 7. PMID 19968874, Free PMC Article
    2. Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories. Zhao S, et al. J Bacteriol, 1993 May. PMID 8387990, Free PMC Article
    3. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    4. Reshuffling of Rhs components to create a new element. Zhao S, et al. J Bacteriol, 1995 Mar. PMID 7868617, Free PMC Article
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transposase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA transposition IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transposase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3624378..3625514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417941.1 putative transposase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417941.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8NI87
      Conserved Domains (2) summary
      COG5433
      Location:317 → 378
      YhhI; Predicted transposase YbfD/YdcC associated with H repeats [Mobilome: prophages, transposons]
      NF033564
      Location:29 → 344
      transpos_ISAs1; ISAs1 family transposase
    Nucleotide Protein
    Heading Accession and Version

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