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    ydhV putative oxidoreductase YdhV [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948756, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydhV
    Official Full Name
    putative oxidoreductase YdhV
    Primary source
    ECOCYC:G6901
    Locus tag
    b1673
    See related
    ASAP:ABE-0005587
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1669
    Summary
    YdhV is related to aldehyde/formaldehyde ferredoxin oxidoreductases. [More information is available at EcoGene: EG13956]. YdhV is a predicted oxidoreductase. [More information is available at EcoCyc: G6901].
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    Genomic context

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    Sequence:
    NC_000913.3 (1751728..1753830, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative cytochrome YdhU Neighboring gene putative 4Fe-4S ferredoxin-like protein YdhX Neighboring gene uncharacterized protein YdhW Neighboring gene putative 4Fe-4S ferredoxin-like protein YdhY Neighboring gene fumarase D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of YdhV as the First Molybdoenzyme Binding a Bis-Mo-MPT Cofactor in Escherichia coli. Reschke S, et al. Biochemistry, 2019 Apr 30. PMID 30945846
    2. Molybdenum cofactor-dependent resistance to N-hydroxylated base analogs in Escherichia coli is independent of MobA function. Kozmin SG, et al. Mutat Res, 2007 Jun 1. PMID 17349664, Free PMC Article
    3. Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. Partridge JD, et al. Microbiology (Reading), 2008 Feb. PMID 18227264
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Studies show that oxidoreductase YdhV (YdhV) has a preference for bis-Mo-MPT over bis-W-MPT to be inserted into the enzyme.
      Title: Identification of YdhV as the First Molybdoenzyme Binding a Bis-Mo-MPT Cofactor in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron-sulfur cluster binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molybdopterin cofactor binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative oxidoreductase YdhV

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1751728..1753830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416188.1 putative oxidoreductase YdhV [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416188.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EHR0, A0A8T5Y7E3
      Conserved Domains (1) summary
      PRK09849
      Location:1 → 700
      PRK09849; putative oxidoreductase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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