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    yecM putative metal-binding enzyme YecM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946415, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yecM
    Official Full Name
    putative metal-binding enzyme YecM
    Primary source
    ECOCYC:G7025
    Locus tag
    b1875
    See related
    ASAP:ABE-0006257
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1876; yecL
    Summary
    YecM has structural similarity to metal binding isomerases and oxygenases . [More information is available at EcoCyc: G7025].
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    Genomic context

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    Sequence:
    NC_000913.3 (1959280..1959846, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cytochrome c quinol dehydrogenase TorY Neighboring gene ncRNA Neighboring gene PF03932 family protein CutC Neighboring gene arginine--tRNA ligase Neighboring gene protein YecV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein surface analysis for function annotation in high-throughput structural genomics pipeline. Binkowski TA, et al. Protein Sci, 2005 Dec. PMID 16322579, Free PMC Article
    2. Conserved protein YecM from Escherichia coli shows structural homology to metal-binding isomerases and oxygenases. Zhang RG, et al. Proteins, 2003 May 1. PMID 12660999, Free PMC Article
    3. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
    4. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    5. Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Lopez-Campistrous A, et al. Mol Cell Proteomics, 2005 Aug. PMID 15911532

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative metal-binding enzyme YecM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1959280..1959846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416389.4 putative metal-binding enzyme YecM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416389.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6M9WPI0
      Conserved Domains (1) summary
      PRK11700
      Location:1 → 187
      PRK11700; VOC family protein
    Nucleotide Protein
    Heading Accession and Version

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