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    bioP biotin transporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948309, updated on 3-Dec-2024

    Summary

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    Official Symbol
    bioP
    Official Full Name
    biotin transporter
    Primary source
    ECOCYC:EG11471
    Locus tag
    b3827
    See related
    ASAP:ABE-0012504
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3821; yigM
    Summary
    YigM belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG11471]. yigM has been identified through bioinformatic analysis as having a possible 54-dependent promoter . [More information is available at EcoCyc: EG11471].
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    Genomic context

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    Sequence:
    NC_000913.3 (4011076..4011975)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene lysophospholipase L2 Neighboring gene phosphosugar phosphatase YigL Neighboring gene DNA-binding transcriptional dual regulator MetR Neighboring gene cobalamin-independent homocysteine transmethylase Neighboring gene putative dienelactone hydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium. Bergholz TM, et al. BMC Microbiol, 2007 Oct 29. PMID 17967175, Free PMC Article
    2. Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli. Reitzer L, et al. Microbiol Mol Biol Rev, 2001 Sep. PMID 11528004, Free PMC Article
    3. Combined, functional genomic-biochemical approach to intermediary metabolism: interaction of acivicin, a glutamine amidotransferase inhibitor, with Escherichia coli K-12. Smulski DR, et al. J Bacteriol, 2001 Jun. PMID 11344143, Free PMC Article
    4. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    biotin transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4011076..4011975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418271.1 biotin transporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418271.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9ACX5
      Conserved Domains (1) summary
      TIGR00950
      Location:11 → 273
      2A78; Carboxylate/Amino Acid/Amine Transporter
    Nucleotide Protein
    Heading Accession and Version

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