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    ybdR putative Zn(2(+))-dependent alcohol dehydrogenase YbdR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949067, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybdR
    Official Full Name
    putative Zn(2(+))-dependent alcohol dehydrogenase YbdR
    Primary source
    ECOCYC:G6335
    Locus tag
    b0608
    See related
    ASAP:ABE-0002099
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0602
    Summary
    AFMB Structural Genomics target Number (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG13537].
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    Genomic context

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    Sequence:
    NC_000913.3 (642088..643326)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene alkyl hydroperoxide reductase, AhpF component Neighboring gene universal stress protein G Neighboring gene protein YldA Neighboring gene nucleoside diphosphate kinase regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative Zn(2(+))-dependent alcohol dehydrogenase YbdR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      642088..643326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415141.1 putative Zn(2(+))-dependent alcohol dehydrogenase YbdR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415141.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAE9Q2E0
      Conserved Domains (1) summary
      cd08283
      Location:1 → 388
      FDH_like_1; Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1
    Nucleotide Protein
    Heading Accession and Version

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