U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pqiC intermembrane transport lipoprotein PqiC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946972, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    pqiC
    Official Full Name
    intermembrane transport lipoprotein PqiC
    Primary source
    ECOCYC:G6492
    Locus tag
    b0952
    See related
    ASAP:ABE-0003223
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0943; ymbA
    Summary
    First 15 aa are predicted to be a type II signal peptide. [More information is available at EcoGene: EG13719].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1014896..1015459)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ATP-binding protein Uup Neighboring gene intermembrane transport protein PqiA Neighboring gene intermembrane transport protein PqiB Neighboring gene ribosome modulation factor Neighboring gene beta-hydroxyacyl-acyl carrier protein dehydratase/isomerase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Screening of target-specific stress-responsive genes for the development of cell-based biosensors using a DNA microarray. Kim BC, et al. Anal Chem, 2005 Dec 15. PMID 16351151
    2. Dual regulation of the paraquat-inducible gene pqi-5 by SoxS and RpoS in Escherichia coli. Koh YS, et al. Mol Microbiol, 1996 Oct. PMID 8899708
    3. Significance of rpoS during maturation of Escherichia coli biofilms. Ito A, et al. Biotechnol Bioeng, 2008 Apr 15. PMID 17979199
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within membrane organization EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    intermembrane transport lipoprotein PqiC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1014896..1015459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415472.2 intermembrane transport lipoprotein PqiC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415472.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7TS18
      Conserved Domains (1) summary
      NF033620
      Location:3 → 184
      pqiC; membrane integrity-associated transporter subunit PqiC
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.