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    letB lipophilic envelope spanning tunnel [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946352, updated on 17-Dec-2024

    Summary

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    Official Symbol
    letB
    Official Full Name
    lipophilic envelope spanning tunnel
    Primary source
    ECOCYC:G7007
    Locus tag
    b1834
    See related
    ASAP:ABE-0006101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1833; yebT
    Summary
    pqiB paralog. [More information is available at EcoGene: EG14022]. YebT is a putative outer membrane protein. [More information is available at EcoCyc: G7007].
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    Genomic context

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    Sequence:
    NC_000913.3 (1917510..1920143)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene RNA chaperone ProQ Neighboring gene free methionine-(R)-sulfoxide reductase Neighboring gene intermembrane transport protein LetA Neighboring gene 16S rRNA m(5)C1407 methyltransferase Neighboring gene DUF1480 domain-containing protein YebV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Role of Ring6 in the Function of the E. coli MCE Protein LetB. Vieni C, et al. J Mol Biol, 2022 Apr 15. PMID 35077766, Free PMC Article
    2. Proteomic analysis of beryllium-induced genotoxicity in an Escherichia coli mutant model system. Taylor-McCabe KJ, et al. Proteomics, 2006 Mar. PMID 16447159
    3. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    4. MCE domain proteins: conserved inner membrane lipid-binding proteins required for outer membrane homeostasis. Isom GL, et al. Sci Rep, 2017 Aug 17. PMID 28819315, Free PMC Article
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Role of Ring6 in the Function of the E. coli MCE Protein LetB.
      Title: Role of Ring6 in the Function of the E. coli MCE Protein LetB.
    2. Mutants defective in MCE domain proteins mlaD, pqiB and yebT were shown to have distinct but partially overlapping phenotypes, but the primary functions of PqiB and YebT differ from MlaD.
      Title: MCE domain proteins: conserved inner membrane lipid-binding proteins required for outer membrane homeostasis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lipophilic envelope spanning tunnel

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1917510..1920143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416348.2 lipophilic envelope spanning tunnel [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416348.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3JGD2, A0A376K1T2
      Conserved Domains (1) summary
      COG3008
      Location:1 → 568
      PqiB; Paraquat-inducible protein B (function unknown) [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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