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    yggU DUF167 domain-containing protein YggU [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947424, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yggU
    Official Full Name
    DUF167 domain-containing protein YggU
    Primary source
    ECOCYC:G7529
    Locus tag
    b2953
    See related
    ASAP:ABE-0009690
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2948
    Summary
    Northeast Structural Genomics Research Consortium (NESG) Target ER14 (http://nesg.org). [More information is available at EcoGene: EG12981]. Structural characterization has been performed by NMR . [More information is available at EcoCyc: G7529].
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    Genomic context

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    Sequence:
    NC_000913.3 (3096383..3096673)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Type II/IV secretion system family protein Neighboring gene PLP homeostasis protein Neighboring gene uncharacterized protein YggT Neighboring gene dITP/XTP pyrophosphatase Neighboring gene heme chaperone HemW Neighboring gene DUF1202 domain-containing protein YggM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Resonance assignments for the hypothetical protein yggU from Escherichia coli. Aramini JM, et al. J Biomol NMR, 2003 Nov. PMID 12975589
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    DUF167 domain-containing protein YggU

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3096383..3096673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417428.2 DUF167 domain-containing protein YggU [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417428.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A192CCI9, A0AA36P8M6, C3SV37, F4T2T0
      Conserved Domains (1) summary
      PRK05090
      Location:1 → 95
      PRK05090; hypothetical protein; Validated
    Nucleotide Protein
    Heading Accession and Version

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