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    rpmB 50S ribosomal subunit protein L28 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946941, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rpmB
    Official Full Name
    50S ribosomal subunit protein L28
    Primary source
    ECOCYC:EG10886
    Locus tag
    b3637
    See related
    ASAP:ABE-0011885
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3627
    Summary
    Overexpression causes abnormal biofilm architecture and mucoidy. [More information is available at EcoGene: EG10886]. The L28 protein is a component of the 50S subunit of the ribosome and is required for ribosome assembly . [More information is available at EcoCyc: EG10886].
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    Genomic context

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    Sequence:
    NC_000913.3 (3811438..3811674, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-formamidopyrimidine glycosylase Neighboring gene 50S ribosomal subunit protein L33 Neighboring gene RadC-like JAB domain-containing protein YicR Neighboring gene fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase Neighboring gene dUTP diphosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Components of the macrolide binding site on the ribosome. Tejedor F, et al. J Antimicrob Chemother, 1985 Jul. PMID 4055551
    2. Primary structure of protein L28 from the large subunit of Escherichia coli ribosomes. Wittmann-Liebold B, et al. FEBS Lett, 1977 Sep 1. PMID 332524
    3. Genetic fine structure of the pyrE region containing the genes for ribosomal proteins L28 and L33 in Escherichia coli. Isono K, et al. Mol Gen Genet, 1980. PMID 6450866
    4. Cloning and the nucleotide sequence of the genes for Escherichia coli ribosomal proteins L28 (rpmB) and L33 (rpmG). Lee JS, et al. Mol Gen Genet, 1981. PMID 7035835
    5. Mutations in the rpmBG operon of Escherichia coli that affect ribosome assembly. Maguire BA, et al. J Bacteriol, 1997 Apr. PMID 9098043, Free PMC Article

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: A method for the chemical generation of N-terminal peptide sequence tags for rapid protein identification.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in ribosomal large subunit assembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within ribosomal large subunit assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    50S ribosomal subunit protein L28

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3811438..3811674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418094.1 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418094.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FHR5
      Conserved Domains (1) summary
      PRK00359
      Location:1 → 76
      rpmB; 50S ribosomal protein L28; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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