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    alsA D-allose ABC transporter ATP binding subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948593, updated on 3-Dec-2024

    Summary

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    Official Symbol
    alsA
    Official Full Name
    D-allose ABC transporter ATP binding subunit
    Primary source
    ECOCYC:EG11959
    Locus tag
    b4087
    See related
    ASAP:ABE-0013394
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4080; yjcW
    Summary
    AlsA is the ATP-binding component of the allose ABC transporter. [More information is available at EcoCyc: EG11959].
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    Genomic context

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    Sequence:
    NC_000913.3 (4309448..4310980, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene linear primary-alkylsulfatase Neighboring gene D-allose kinase Neighboring gene D-allulose-6-phosphate 3-epimerase Neighboring gene D-allose ABC transporter membrane subunit Neighboring gene D-allose ABC transporter periplasmic binding protein Neighboring gene DNA-binding transcriptional repressor AlsR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of D-allose binding protein from Escherichia coli bound to D-allose at 1.8 A resolution. Chaudhuri BN, et al. J Mol Biol, 1999 Mar 12. PMID 10064713
    2. Sequence relationships between integral inner membrane proteins of binding protein-dependent transport systems: evolution by recurrent gene duplications. Saurin W, et al. Protein Sci, 1994 Feb. PMID 8003968, Free PMC Article
    3. D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. Poulsen TS, et al. J Bacteriol, 1999 Nov. PMID 10559180, Free PMC Article
    4. The D-allose operon of Escherichia coli K-12. Kim C, et al. J Bacteriol, 1997 Dec. PMID 9401019, Free PMC Article
    5. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ABC-type D-allose transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-allose transmembrane transport EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in D-allose transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in D-ribose transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    D-allose ABC transporter ATP binding subunit
    NP_418511.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4309448..4310980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418511.1 D-allose ABC transporter ATP binding subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418511.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAE9TLA3
      Conserved Domains (1) summary
      PRK09700
      Location:1 → 510
      PRK09700; D-allose ABC transporter ATP-binding protein AlsA
    Nucleotide Protein
    Heading Accession and Version

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