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    torC cytochrome c menaquinol dehydrogenase TorC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946252, updated on 17-Dec-2024

    Summary

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    Official Symbol
    torC
    Official Full Name
    cytochrome c menaquinol dehydrogenase TorC
    Primary source
    ECOCYC:EG11815
    Locus tag
    b0996
    See related
    ASAP:ABE-0003370
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0987
    Summary
    TorC is a pentahemic c-type cytochrome that is anchored to the inner membrane. [More information is available at EcoCyc: EG11815].
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    Genomic context

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    Sequence:
    NC_000913.3 (1058084..1059256)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sensor histidine kinase TorS Neighboring gene periplasmic trimethylamine-N-oxide binding protein Neighboring gene DNA-binding transcriptional dual regulator TorR Neighboring gene trimethylamine N-oxide reductase 1 Neighboring gene trimethylamine-N-oxide reductase-specific chaperone Neighboring gene chaperone modulator CbpM Neighboring gene curved DNA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Aerobic TMAO respiration in Escherichia coli. Ansaldi M, et al. Mol Microbiol, 2007 Oct. PMID 17850256
    2. Purification and some properties of inducible tertiary amine N-oxide reductase from Escherichia coli. Shimokawa O, et al. J Biochem, 1979 Dec. PMID 393699
    3. The inducible trimethylamine N-oxide reductase of Escherichia coli K12: its localization and inducers. Silvestro A, et al. Biochim Biophys Acta, 1989 Nov 30. PMID 2512991
    4. The inducible trimethylamine-N-oxide reductase of Escherichia coli K12: biochemical and immunological studies. Silvestro A, et al. Biochim Biophys Acta, 1988 Apr 28. PMID 3282544
    5. Further characterization of trimethylamine N-oxide reductase from Escherichia coli, a molybdoprotein. Yamamoto I, et al. J Biochem, 1986 Jun. PMID 3528139

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables electron transfer activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aerobic respiration IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within aerobic respiration IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within anaerobic electron transport chain IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in anaerobic electron transport chain IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within anaerobic respiration EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in anaerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in anaerobic respiration IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within anaerobic respiration IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of signal transduction IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of pH IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Gram-negative-bacterium-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of trimethylamine-N-oxide reductase (cytochrome c) complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c menaquinol dehydrogenase TorC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1058084..1059256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415516.1 cytochrome c menaquinol dehydrogenase TorC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415516.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H2V6R0, A0A192CLE3, A0AA36KW37, Q1RDM0
      Conserved Domains (1) summary
      PRK15032
      Location:1 → 390
      PRK15032; pentaheme c-type cytochrome TorC
    Nucleotide Protein
    Heading Accession and Version

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