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    ydeJ PF02464 family protein YdeJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946067, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydeJ
    Official Full Name
    PF02464 family protein YdeJ
    Primary source
    ECOCYC:EG11645
    Locus tag
    b1537
    See related
    ASAP:ABE-0005131
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1530
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    Genomic context

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    Sequence:
    NC_000913.3 (1624773..1625291)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene diguanylate cyclase DgcZ Neighboring gene BOF family protein YdeI Neighboring gene peptidyl-dipeptidase Dcp Neighboring gene 3-hydroxy acid dehydrogenase YdfG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. Cohen SP, et al. J Bacteriol, 1993 Mar. PMID 8383113, Free PMC Article
    2. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PF02464 family protein YdeJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1624773..1625291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416055.1 PF02464 family protein YdeJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416055.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6BSE5
      Conserved Domains (1) summary
      PRK03657
      Location:6 → 162
      PRK03657; 2-oxo-tetronate isomerase
    Nucleotide Protein
    Heading Accession and Version

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