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    yeeJ inverse autotransporter adhesin [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946498, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yeeJ
    Official Full Name
    inverse autotransporter adhesin
    Primary source
    ECOCYC:G7064
    Locus tag
    b1978
    See related
    ASAP:ABE-0006563
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1974
    Summary
    YeeJ contains 13 Big-1 (Bacterial Ig-like) repeate domains from residues 739-2053. [More information is available at EcoGene: EG13378]. YeeJ is a potential adhesin. [More information is available at EcoCyc: G7064].
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    Genomic context

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    Sequence:
    NC_000913.3 (2044938..2052014)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Mlc titration factor Neighboring gene tRNA-Asn Neighboring gene pseudo Neighboring gene shikimate:H(+) symporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal β-strand. Schreiber S, et al. J Mol Biol, 2024 Oct 15. PMID 39173735
    2. YeeJ is an inverse autotransporter from Escherichia coli that binds to peptidoglycan and promotes biofilm formation. Martinez-Gil M, et al. Sci Rep, 2017 Sep 12. PMID 28900103, Free PMC Article
    3. Combined inactivation and expression strategy to study gene function under physiological conditions: application to identification of new Escherichia coli adhesins. Roux A, et al. J Bacteriol, 2005 Feb. PMID 15659678, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal beta-strand.
      Title: The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal β-strand.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell adhesion involved in biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell adhesion involved in single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    inverse autotransporter adhesin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2044938..2052014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416485.4 inverse autotransporter adhesin [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416485.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A895NR20
      Conserved Domains (3) summary
      smart00634
      Location:1457 → 1551
      BID_1; Bacterial Ig-like domain (group 1)
      pfam09134
      Location:535 → 624
      Invasin_D3; Invasin, domain 3
      pfam11924
      Location:143 → 419
      IAT_beta; Inverse autotransporter, beta-domain
    Nucleotide Protein
    Heading Accession and Version

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