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    yggM DUF1202 domain-containing protein YggM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947455, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yggM
    Official Full Name
    DUF1202 domain-containing protein YggM
    Primary source
    ECOCYC:EG12704
    Locus tag
    b2956
    See related
    ASAP:ABE-0009697
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2951
    Summary
    First 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12704].
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    Genomic context

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    Sequence:
    NC_000913.3 (3098558..3099565, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YggT Neighboring gene DUF167 domain-containing protein YggU Neighboring gene dITP/XTP pyrophosphatase Neighboring gene heme chaperone HemW Neighboring gene L-asparaginase 2 Neighboring gene DUF2884 domain-containing protein YggN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. L-asparaginase II of Escherichia coli K-12: cloning, mapping and sequencing of the ansB gene. Bonthron DT. Gene, 1990 Jul 2. PMID 2144836
    2. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli. Pushpker R, et al. Microbiology (Reading), 2022 Dec. PMID 36748554
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
      Title: Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF1202 domain-containing protein YggM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3098558..3099565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417431.1 DUF1202 domain-containing protein YggM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417431.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MA24, A0AAN5UBU6
      Conserved Domains (1) summary
      pfam06717
      Location:14 → 320
      DUF1202; Protein of unknown function (DUF1202)
    Nucleotide Protein
    Heading Accession and Version

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