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    yhhX putative oxidoreductase YhhX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947944, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yhhX
    Official Full Name
    putative oxidoreductase YhhX
    Primary source
    ECOCYC:G7757
    Locus tag
    b3440
    See related
    ASAP:ABE-0011232
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3425
    Summary
    AFMB Structural Genomics target Number 65 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG12944]. Based on sequence similarity, YhhX is predicted to be a D-galactose 1-dehydrogenase . [More information is available at EcoCyc: G7757].
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    Genomic context

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    Sequence:
    NC_000913.3 (3579768..3580805, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor GntR Neighboring gene quercetin 2,3-dioxygenase Neighboring gene ncRNA Neighboring gene N-acetyltransferase YhhY

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of FUR regulons in gamma-proteobacteria. Panina EM, et al. Nucleic Acids Res, 2001 Dec 15. PMID 11812853, Free PMC Article
    2. A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli. Vassinova N, et al. Microbiology (Reading), 2000 Dec. PMID 11101675
    3. Identifying Escherichia coli genes involved in intrinsic multidrug resistance. Duo M, et al. Appl Microbiol Biotechnol, 2008 Dec. PMID 18807027
    4. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
    5. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables scyllo-inositol dehydrogenase (NADP+) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in antibiotic biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative oxidoreductase YhhX

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3579768..3580805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417897.1 putative oxidoreductase YhhX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417897.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1NAJ6
      Conserved Domains (1) summary
      PRK10206
      Location:2 → 345
      PRK10206; putative oxidoreductase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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