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    yjbH putative lipoprotein YjbH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948527, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjbH
    Official Full Name
    putative lipoprotein YjbH
    Primary source
    ECOCYC:EG11926
    Locus tag
    b4029
    See related
    ASAP:ABE-0013176
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4021
    Summary
    Overexpression of the yjbEFGH operon alters colony morphology and leads to production of a novel extracellular polysaccharide (Ferrieres, 2007). yjbH and gfcD are paralogs. [More information is available at EcoGene: EG11926]. Sequence similarity suggests that YjbH may be a lipoprotein and/or an outer membrane porin . [More information is available at EcoCyc: EG11926].
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    Genomic context

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    Sequence:
    NC_000913.3 (4237634..4239730)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YjbE Neighboring gene lipoprotein YjbF Neighboring gene capsule biosynthesis GfcC family protein YjbG Neighboring gene PF17089 family protein YjbT Neighboring gene putative phosphate starvation-inducible protein PsiE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Induction of the yjbEFGH operon is regulated by growth rate and oxygen concentration. Ionescu M, et al. Arch Microbiol, 2008 Mar. PMID 17957352
    2. Overproduction of exopolysaccharides by an Escherichia coli K-12 rpoS mutant in response to osmotic stress. Ionescu M, et al. Appl Environ Microbiol, 2009 Jan. PMID 18997023, Free PMC Article
    3. The RcsC sensor kinase is required for normal biofilm formation in Escherichia coli K-12 and controls the expression of a regulon in response to growth on a solid surface. Ferrières L, et al. Mol Microbiol, 2003 Dec. PMID 14651646
    4. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    5. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within polysaccharide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative lipoprotein YjbH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4237634..4239730
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418453.1 putative lipoprotein YjbH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418453.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAE9Q0G7
      Conserved Domains (1) summary
      pfam06082
      Location:30 → 692
      YjbH; Exopolysaccharide biosynthesis protein YbjH
    Nucleotide Protein
    Heading Accession and Version

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