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    ykfG RadC-like JAB domain-containing protein YkfG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944930, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ykfG
    Official Full Name
    RadC-like JAB domain-containing protein YkfG
    Primary source
    ECOCYC:G6122
    Locus tag
    b0247
    See related
    ASAP:ABE-0000841
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0249
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    Genomic context

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    Sequence:
    NC_000913.3 (264256..264732, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene antitoxin of the YkfI-YafW toxin-antitoxin pair Neighboring gene DUF987 domain-containing protein YkfH Neighboring gene protein YafX Neighboring gene protein YkfF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The response of Escherichia coli to the alkylating agents chloroacetaldehyde and styrene oxide. Muenter MM, et al. Mutat Res Genet Toxicol Environ Mutagen, 2019 Apr. PMID 30857727, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RadC-like JAB domain-containing protein YkfG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      264256..264732 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414781.1 RadC-like JAB domain-containing protein YkfG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414781.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377E8T4
      Conserved Domains (1) summary
      COG2003
      Location:1 → 158
      RadC; DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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