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    bssR regulator of biofilm formation [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945466, updated on 3-Dec-2024

    Summary

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    Official Symbol
    bssR
    Official Full Name
    regulator of biofilm formation
    Primary source
    ECOCYC:G6436
    Locus tag
    b0836
    See related
    ASAP:ABE-0002849
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0826; yliH
    Summary
    Increases Mtr expression and indole import; decreases AcrEF expression and indole export. [More information is available at EcoGene: EG13479]. A bssR deletion mutant does not have a significant growth defect. [More information is available at EcoCyc: G6436].
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    Genomic context

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    Sequence:
    NC_000913.3 (878248..878631)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative diguanylate cyclase DgcI Neighboring gene ribosomal protein S12 methylthiotransferase RimO Neighboring gene aldose sugar dehydrogenase YliI Neighboring gene glutathione S-transferase GstB Neighboring gene D-alanyl-D-alanine carboxypeptidase DacC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Initial characterization of yliH in Salmonella typhimurium. Park KH, et al. J Microbiol, 2007 Dec. PMID 18176541
    2. RNA expression analysis using a 30 base pair resolution Escherichia coli genome array. Selinger DW, et al. Nat Biotechnol, 2000 Dec. PMID 11101804
    3. Global gene expression in Escherichia coli biofilms. Schembri MA, et al. Mol Microbiol, 2003 Apr. PMID 12657059
    4. YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Domka J, et al. Appl Environ Microbiol, 2006 Apr. PMID 16597943, Free PMC Article
    5. Gene expression in Escherichia coli biofilms. Ren D, et al. Appl Microbiol Biotechnol, 2004 May. PMID 14727089

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. YliH (BssR) regulates biofilm formation through signal secretion together with YceP. [BssR]
      Title: YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of gene expression IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regulator of biofilm formation

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      878248..878631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415357.1 regulator of biofilm formation [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415357.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A192CKF6, A0A7I6H1J0, A0A979GDI5, A0AA36KVN6, A7ZJQ3, Q1RE89
      Conserved Domains (1) summary
      pfam10799
      Location:1 → 126
      YliH; Biofilm formation protein (YliH/bssR)
    Nucleotide Protein
    Heading Accession and Version

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