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    ymfT putative DNA-binding transcriptional regulator YmfT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945720, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ymfT
    Official Full Name
    putative DNA-binding transcriptional regulator YmfT
    Primary source
    ECOCYC:G6590
    Locus tag
    b1146
    See related
    ASAP:ABE-0003856
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    croE; ECK1132
    Summary
    CroE(YmfT )is a C48Y variant of a putative Cro-like repressor protein from Shigella flexneri bacteriophage V. [More information is available at EcoGene: EG14414].
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    Genomic context

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    Sequence:
    NC_000913.3 (1203024..1203224)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YmfI Neighboring gene uncharacterized protein YmfJ Neighboring gene putative repressor protein YmfK Neighboring gene uncharacterized protein YmfL Neighboring gene cell division inhibitor YmfM Neighboring gene pseudo Neighboring gene chimeric replication protein/phage terminase YmfN Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YmfT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1203024..1203224
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415664.2 putative DNA-binding transcriptional regulator YmfT [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415664.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3J6F4
      Conserved Domains (1) summary
      cl22854
      Location:13 → 64
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version

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