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    ynjC putative ABC transporter membrane subunit YnjC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946273, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ynjC
    Official Full Name
    putative ABC transporter membrane subunit YnjC
    Primary source
    ECOCYC:G6950
    Locus tag
    b1755
    See related
    ASAP:ABE-0005843
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1753
    Summary
    YnjC is a membrane component of a predicted metabolite uptake ABC transporter. [More information is available at EcoCyc: G6950].
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    Genomic context

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    Sequence:
    NC_000913.3 (1837212..1838747)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DedA family protein YdjZ Neighboring gene AhpD-like domain-containing protein YnjA Neighboring gene putative ABC transporter periplasmic binding protein YnjB Neighboring gene putative ABC transporter ATP-binding protein YnjD Neighboring gene molybdopterin synthase sulfurtransferase Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnjF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ATP-binding cassette transporters in Escherichia coli. Moussatova A, et al. Biochim Biophys Acta, 2008 Sep. PMID 18634750
    2. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    5. The Transporter Classification Database (TCDB): recent advances. Saier MH Jr, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26546518, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex IC
    Inferred by Curator
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative ABC transporter membrane subunit YnjC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1837212..1838747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416269.4 putative ABC transporter membrane subunit YnjC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416269.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EFN5
      Conserved Domains (1) summary
      COG4135
      Location:14 → 511
      YnjC; ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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