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    yedI DUF808 domain-containing inner membrane protein YedI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946465, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yedI
    Official Full Name
    DUF808 domain-containing inner membrane protein YedI
    Primary source
    ECOCYC:EG12709
    Locus tag
    b1958
    See related
    ASAP:ABE-0006500
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1956
    Summary
    YedI is an inner membrane protein with five predicted transmembrane domains. [More information is available at EcoCyc: EG12709].
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    Genomic context

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    Sequence:
    NC_000913.3 (2028449..2029366, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative mannosyl-3-phosphoglycerate phosphatase Neighboring gene diguanylate cyclase DgcQ Neighboring gene protein YodC Neighboring gene putative transporter YedA Neighboring gene DNA mismatch endonuclease Vsr Neighboring gene DNA-cytosine methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MutK may be a 32 kDa protein and be widespread among proteobacteria. Moreira D. Mol Microbiol, 1999 Jul. PMID 10411738
    2. Nucleotide sequence of the dcm locus of Escherichia coli K12. Hanck T, et al. Nucleic Acids Res, 1989 Jul 25. PMID 2527357, Free PMC Article
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF808 domain-containing inner membrane protein YedI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2028449..2029366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416467.1 DUF808 domain-containing inner membrane protein YedI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416467.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1NF30
      Conserved Domains (1) summary
      PRK10062
      Location:3 → 305
      PRK10062; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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