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    nudI pyrimidine deoxynucleotide diphosphatase NudI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946740, updated on 17-Dec-2024

    Summary

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    Official Symbol
    nudI
    Official Full Name
    pyrimidine deoxynucleotide diphosphatase NudI
    Primary source
    ECOCYC:G7164
    Locus tag
    b2251
    See related
    ASAP:ABE-0007449
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2244; yfaO
    Summary
    Nudix hydrolase. [More information is available at EcoGene: EG13275]. The nudI gene product is a member of the Nudix hydrolase superfamily of nucleoside diphosphatases. [More information is available at EcoCyc: G7164].
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    Genomic context

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    Sequence:
    NC_000913.3 (2364554..2364979)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene IPR008135 CinA family protein YfaY Neighboring gene putative porin YfaZ Neighboring gene putative lipopolysaccharide core heptose(II)-phosphate phosphatase Neighboring gene UDP-4-amino-4-deoxy-L-arabinose aminotransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression, crystallization and preliminary X-ray crystallographic analysis of Nudix hydrolase Orf141 from Escherichia coli K-1. Jung J, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2007 Sep 1. PMID 17768363, Free PMC Article
    2. Three new Nudix hydrolases from Escherichia coli. Xu W, et al. J Biol Chem, 2006 Aug 11. PMID 16766526
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 8-oxo-(d)RTP hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables dCTP diphosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables dCTP diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables dTTP diphosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables dTTP diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables dUTP diphosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables dUTP diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleoside triphosphate diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    pyrimidine deoxynucleotide diphosphatase NudI
    NP_416754.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2364554..2364979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416754.1 pyrimidine deoxynucleotide diphosphatase NudI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416754.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8E0KVQ1
      Conserved Domains (1) summary
      PRK15472
      Location:1 → 141
      PRK15472; nucleoside triphosphatase NudI; Provisional
    Nucleotide Protein
    Heading Accession and Version

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