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    yghG lipoprotein YghG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947470, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yghG
    Official Full Name
    lipoprotein YghG
    Primary source
    ECOCYC:G7538
    Locus tag
    b2971
    See related
    ASAP:ABE-0009748
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2966
    Summary
    First 24 aa are a type II signal peptide. [More information is available at EcoGene: EG12991].
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    Genomic context

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    Sequence:
    NC_000913.3 (3113067..3113477, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative type II secretion system L-type protein YghE Neighboring gene protein YqhJ Neighboring gene putative type II secretion system C-type protein YghF Neighboring gene prepilin peptidase Neighboring gene putative lipoprotein YghJ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. YghG (GspSβ) is a novel pilot protein required for localization of the GspSβ type II secretion system secretin of enterotoxigenic Escherichia coli. Strozen TG, et al. Infect Immun, 2012 Aug. PMID 22585966, Free PMC Article
    2. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    3. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    4. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    5. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipoprotein YghG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3113067..3113477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417445.1 lipoprotein YghG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417445.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N3A5L3
      Conserved Domains (1) summary
      pfam16549
      Location:31 → 117
      T2SSS_2; Type II secretion system (T2SS) pilotin, S protein
    Nucleotide Protein
    Heading Accession and Version

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