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    rdcA regulator of diguanylate cyclase RdcA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948620, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rdcA
    Official Full Name
    regulator of diguanylate cyclase RdcA
    Primary source
    ECOCYC:EG11210
    Locus tag
    b4109
    See related
    ASAP:ABE-0013456
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    crfC; ECK4102; yjdA
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    Genomic context

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    Sequence:
    NC_000913.3 (4327135..4329363)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF06983 family protein YjdN Neighboring gene zinc ribbon domain-containing protein YjdM Neighboring gene regulator of diguanylate cyclase RdcB Neighboring gene osmolyte:H(+) symporter ProP Neighboring gene small regulatory membrane protein PmrR Neighboring gene sensor histidine kinase BasS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive genetic characterization of bacterial motility. Girgis HS, et al. PLoS Genet, 2007 Sep. PMID 17941710, Free PMC Article
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B. Chen CM, et al. J Biol Chem, 1990 Mar 15. PMID 2155230
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    regulator of diguanylate cyclase RdcA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4327135..4329363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418533.1 regulator of diguanylate cyclase RdcA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418533.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FSF9, A0A8S7CPR0
      Conserved Domains (1) summary
      PRK09866
      Location:1 → 741
      PRK09866; clamp-binding protein CrfC
    Nucleotide Protein
    Heading Accession and Version

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