U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjiX PF04328 family protein YjiX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949090, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjiX
    Official Full Name
    PF04328 family protein YjiX
    Primary source
    ECOCYC:G7941
    Locus tag
    b4353
    See related
    ASAP:ABE-0014276
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4343
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4588876..4589079, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Type IV methyl-directed restriction enzyme EcoKMrr Neighboring gene P-loop guanosine triphosphatase YjiA Neighboring gene pyruvate:H(+) symporter Neighboring gene methyl-accepting chemotaxis protein Tsr

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Molecular and functional characterization of a carbon starvation gene of Escherichia coli. Schultz JE, et al. J Mol Biol, 1991 Mar 5. PMID 1848300
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    PF04328 family protein YjiX

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4588876..4589079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418773.1 PF04328 family protein YjiX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418773.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0ADC8
      Conserved Domains (1) summary
      COG2879
      Location:1 → 67
      YbdD; Uncharacterized short protein YbdD, DUF466 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.