U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjjA DUF2501 domain-containing protein YjjA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948887, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjjA
    Official Full Name
    DUF2501 domain-containing protein YjjA
    Primary source
    ECOCYC:EG11214
    Locus tag
    b4360
    See related
    ASAP:ABE-0014301
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4350
    Summary
    First 25 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG11214]. yjjA is cotranscribed with dnaT and dnaC. [More information is available at EcoCyc: EG11214].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4599695..4600189, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-galactonate oxidoreductase Neighboring gene phosphoglycerol transferase I Neighboring gene DNA replication protein DnaC Neighboring gene primosomal protein DnaT

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Operon structure of dnaT and dnaC genes essential for normal and stable DNA replication of Escherichia coli chromosome. Masai H, et al. J Biol Chem, 1988 Oct 15. PMID 2844800
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF2501 domain-containing protein YjjA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4599695..4600189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418780.2 DUF2501 domain-containing protein YjjA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418780.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A066SXF0, A0A0E0Y7V5, A0A192CHQ4, A0A1X3HYD6, A0A1X3J7V3, A0A1X3JMY9, A0A7I6HC93, A0A828UE75, A0A836N824, A0AA36PCY3, A0AAN1SB60, A0AAN4NN49, A7ZVQ0, W1F786, W8T3G1
      Conserved Domains (1) summary
      PRK11667
      Location:1 → 163
      PRK11667; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.