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    yahO DUF1471 domain-containing protein YahO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944985, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yahO
    Official Full Name
    DUF1471 domain-containing protein YahO
    Primary source
    ECOCYC:G6194
    Locus tag
    b0329
    See related
    ASAP:ABE-0001130
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0327
    Summary
    The first 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG13599]. Expression of yahO is dependent on S . [More information is available at EcoCyc: G6194].
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    Genomic context

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    Sequence:
    NC_000913.3 (346484..346759)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YahM Neighboring gene putative amino acid exporter YahN Neighboring gene DNA-binding transcriptional dual regulator PrpR Neighboring gene 2-methylisocitrate lyase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium. Ibanez-Ruiz M, et al. J Bacteriol, 2000 Oct. PMID 11004173, Free PMC Article
    2. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. Lacour S, et al. J Bacteriol, 2004 Nov. PMID 15489429, Free PMC Article
    3. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE, et al. Electrophoresis, 1998 Apr. PMID 9588799
    4. Climbing the protein ladder. Dovichi NJ. Nat Biotechnol, 2004 Oct. PMID 15470461
    5. Protein sequencing by mass analysis of polypeptide ladders after controlled protein hydrolysis. Zhong H, et al. Nat Biotechnol, 2004 Oct. PMID 15361881

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF1471 domain-containing protein YahO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      346484..346759
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414863.1 DUF1471 domain-containing protein YahO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414863.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A776QKH5
      Conserved Domains (1) summary
      PRK09929
      Location:1 → 91
      PRK09929; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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