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    pgpA phosphatidylglycerophosphatase A [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947542, updated on 3-Dec-2024

    Summary

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    Official Symbol
    pgpA
    Official Full Name
    phosphatidylglycerophosphatase A
    Primary source
    ECOCYC:EG10704
    Locus tag
    b0418
    See related
    ASAP:ABE-0001454
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0412; yajN
    Summary
    The pgpA gene is nonessential. [More information is available at EcoGene: EG10704].
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    Genomic context

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    Sequence:
    NC_000913.3 (436589..437107)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene transcription antitermination protein NusB Neighboring gene thiamine monophosphate kinase Neighboring gene 1-deoxyxylulose-5-phosphate synthase YajO Neighboring gene 1-deoxy-D-xylulose-5-phosphate synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membrane-bound phosphatases in Escherichia coli: sequence of the pgpA gene. Icho T. J Bacteriol, 1988 Nov. PMID 2846510, Free PMC Article
    2. Multiple genes for membrane-bound phosphatases in Escherichia coli and their action on phospholipid precursors. Icho T, et al. J Bacteriol, 1983 Feb. PMID 6296050, Free PMC Article
    3. Phosphatidyl glycerophosphate phosphatase. Chang YY, et al. J Lipid Res, 1967 Sep. PMID 4292860
    4. NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes. Torrents E, et al. J Bacteriol, 2007 Jul. PMID 17496099, Free PMC Article
    5. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lipid phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables lipid phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphatidylglycerophosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatidylglycerophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphatidylglycerophosphatase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables phosphatidylglycerophosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within glycerophospholipid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phosphatidylglycerol biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phosphatidylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phospholipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phospholipid dephosphorylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phospholipid dephosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to magnesium ion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylglycerophosphatase A
    NP_414952.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      436589..437107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414952.1 phosphatidylglycerophosphatase A [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414952.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MTD9, A0A485JKT1, A0A5D8M3H4
      Conserved Domains (1) summary
      PRK11068
      Location:8 → 171
      PRK11068; phosphatidylglycerophosphatase A; Provisional
    Nucleotide Protein
    Heading Accession and Version

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