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    abrB putative regulator [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945321, updated on 3-Dec-2024

    Summary

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    Official Symbol
    abrB
    Official Full Name
    putative regulator
    Primary source
    ECOCYC:G6384
    Locus tag
    b0715
    See related
    ASAP:ABE-0002435
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0704; ybgN
    Summary
    An abrB mutation causes an unstable phenotype with respect to anaerobic, Ada-independent expression of the aidB gene . [More information is available at EcoCyc: G6384].
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    Genomic context

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    Sequence:
    NC_000913.3 (746723..747769, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase component B Neighboring gene 5-oxoprolinase component C Neighboring gene 5-oxoprolinase component A Neighboring gene endonuclease VIII Neighboring gene putative fimbrial protein YbgO Neighboring gene putative fimbrial chaperone YbgP Neighboring gene putative fimbrial usher protein YbgQ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Induction of the Escherichia coli aidB gene under oxygen-limiting conditions requires a functional rpoS (katF) gene. Volkert MR, et al. J Bacteriol, 1994 Dec. PMID 8002588, Free PMC Article
    2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      746723..747769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415243.4 putative regulator [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415243.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377F7B2
      Conserved Domains (1) summary
      COG3180
      Location:1 → 345
      AbrB; Uncharacterized membrane protein AbrB, regulator of aidB expression [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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