U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cpoB cell division coordinator CpoB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947227, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    cpoB
    Official Full Name
    cell division coordinator CpoB
    Primary source
    ECOCYC:EG12854
    Locus tag
    b0742
    See related
    ASAP:ABE-0002523
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0731; ybgF
    Summary
    First 26 aa predicted to be type I signal peptide. [More information is available at EcoGene: EG12854]. YbgF is a periplasmic protein member of the YbgC-YbgF-TolQ-R-A-B-Pal Cell Envelope Complex., also known as the Tol-Pal system. [More information is available at EcoCyc: EG12854].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (779598..780389)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Tol-Pal system periplasmic protein TolB Neighboring gene peptidoglycan-associated outer membrane lipoprotein Pal Neighboring gene tRNA-Lys Neighboring gene tRNA-Val

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer. Krachler AM, et al. Proteins, 2010 Jul. PMID 20455268
    2. Coordination of peptidoglycan synthesis and outer membrane constriction during Escherichia coli cell division. Gray AN, et al. Elife, 2015 May 7. PMID 25951518, Free PMC Article
    3. Fitness cost of a mcr-1-carrying IncHI2 plasmid. Ma K, et al. PLoS One, 2018. PMID 30586457, Free PMC Article
    4. The excC gene of Escherichia coli K-12 required for cell envelope integrity encodes the peptidoglycan-associated lipoprotein (PAL). Lazzaroni JC, et al. Mol Microbiol, 1992 Mar. PMID 1574003
    5. Genetics of resistance to colicins in Escherichia coli K-12: cross-resistance among colicins of group B. Davies JK, et al. J Bacteriol, 1975 Jul. PMID 124727, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in FtsZ-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell division EXP
    Inferred from Experiment
    more info
    		 PubMed 
    acts_upstream_of_or_within cell division IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein trimerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in outer membrane-bounded periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cell division coordinator CpoB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      779598..780389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415270.1 cell division coordinator CpoB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415270.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MUE6
      Conserved Domains (2) summary
      PRK10803
      Location:1 → 263
      PRK10803; tol-pal system protein YbgF; Provisional
      sd00006
      Location:146 → 171
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.