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    xisE putative excisionase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945705, updated on 3-Dec-2024

    Summary

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    Official Symbol
    xisE
    Official Full Name
    putative excisionase
    Primary source
    ECOCYC:G6585
    Locus tag
    b1141
    See related
    ASAP:ABE-0003838
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1127; ymfG
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    Genomic context

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    Sequence:
    NC_000913.3 (1200787..1201032, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YmfE Neighboring gene cell death peptidase Lit Neighboring gene putative integrase Neighboring gene putative protein YmfH Neighboring gene uncharacterized protein YmfI Neighboring gene uncharacterized protein YmfJ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative excisionase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1200787..1201032 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415659.1 putative excisionase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415659.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P75970
      Conserved Domains (1) summary
      pfam07825
      Location:5 → 75
      Exc; Excisionase-like protein
    Nucleotide Protein
    Heading Accession and Version

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