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    tfaR putative tail fiber assembly protein TfaR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946062, updated on 3-Dec-2024

    Summary

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    Official Symbol
    tfaR
    Official Full Name
    putative tail fiber assembly protein TfaR
    Primary source
    ECOCYC:G6696
    Locus tag
    b1373
    See related
    ASAP:ABE-0004597
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1368; ynaC
    Summary
    Induced during biofilm formation. [More information is available at EcoGene: EG13371]. Regulation has been described . [More information is available at EcoCyc: G6696].
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    Genomic context

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    Sequence:
    NC_000913.3 (1432411..1432986)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative prophage side tail fiber protein StfR Neighboring gene putative site-specific recombinase Neighboring gene uncharacterized protein YnaE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Gene expression in Escherichia coli biofilms. Ren D, et al. Appl Microbiol Biotechnol, 2004 May. PMID 14727089
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative tail fiber assembly protein TfaR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1432411..1432986
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415891.1 putative tail fiber assembly protein TfaR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415891.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7FIY4
      Conserved Domains (1) summary
      pfam02413
      Location:72 → 191
      Caudo_TAP; Caudovirales tail fibre assembly protein, lambda gpK
    Nucleotide Protein
    Heading Accession and Version

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