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    uspF universal stress protein F [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945948, updated on 3-Dec-2024

    Summary

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    Official Symbol
    uspF
    Official Full Name
    universal stress protein F
    Primary source
    ECOCYC:G6699
    Locus tag
    b1376
    See related
    ASAP:ABE-0004605
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1371; UP03; ynaF; yzzL
    Summary
    NMR solution structure determined for Escherichia coli UspF(YnaF) (Saveanu, 2002). otherPDB (M. jannaschii): [More information is available at EcoGene: EG12674]. UspF is a nucleotide binding protein in the class II universal stress protein family . [More information is available at EcoCyc: G6699].
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    Genomic context

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    Sequence:
    NC_000913.3 (1435185..1435619, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YnaM Neighboring gene pseudo Neighboring gene outer membrane porin N Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Domain swapping reveals that the N-terminal domain of the sensor kinase KdpD in Escherichia coli is important for signaling. Heermann R, et al. BMC Microbiol, 2009 Jul 9. PMID 19589130, Free PMC Article
    2. Heterodimer formation within universal stress protein classes revealed by an in silico and experimental approach. Nachin L, et al. J Mol Biol, 2008 Jul 4. PMID 18514734
    3. Proteome analysis to assess physiological changes in Escherichia coli grown under glucose-limited fed-batch conditions. Raman B, et al. Biotechnol Bioeng, 2005 Nov 5. PMID 16180237
    4. Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility. Nachin L, et al. J Bacteriol, 2005 Sep. PMID 16159758, Free PMC Article
    5. Universal stress proteins in Escherichia coli. Siegele DA. J Bacteriol, 2005 Sep. PMID 16159755, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of bacterial-type flagellum-dependent cell motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    universal stress protein F

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1435185..1435619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415894.4 universal stress protein F [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415894.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5ZQN8
      Conserved Domains (1) summary
      PRK15005
      Location:1 → 144
      PRK15005; universal stress protein UspF
    Nucleotide Protein
    Heading Accession and Version

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