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    yobD DUF986 domain-containing inner membrane protein YobD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946343, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yobD
    Official Full Name
    DUF986 domain-containing inner membrane protein YobD
    Primary source
    ECOCYC:G6998
    Locus tag
    b1820
    See related
    ASAP:ABE-0006062
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1818
    Summary
    YobD is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: G6998].
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    Genomic context

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    Sequence:
    NC_000913.3 (1904801..1905259)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene mannose-specific PTS enzyme IIC component Neighboring gene mannose-specific PTS enzyme IID component Neighboring gene Mn(2(+)) exporter Neighboring gene 23S rRNA m(1)G745 methyltransferase Neighboring gene transcription antiterminator and regulator of mRNA stability CspC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF986 domain-containing inner membrane protein YobD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1904801..1905259
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416334.1 DUF986 domain-containing inner membrane protein YobD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416334.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377B9U3
      Conserved Domains (1) summary
      PRK02913
      Location:3 → 152
      PRK02913; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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