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    insL3 putative IS186/IS421 transposase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946896, updated on 19-Sep-2024

    Summary

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    Official Symbol
    insL3
    Official Full Name
    putative IS186/IS421 transposase
    Primary source
    ECOCYC:G7255
    Locus tag
    b2394
    See related
    ASAP:ABE-0007897
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0016; yi81-3
    Summary
    IS186 is an insertion sequence element that appears three times in a typical Escherichia coli genome. [More information is available at EcoCyc: G7255].
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    Genomic context

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    Sequence:
    NC_000913.3 (2514331..2515443)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Mn(2(+))/Fe(2(+)): H(+) symporter MntH Neighboring gene protein YpeD Neighboring gene nucleoside:H(+) symporter NupC Neighboring gene putative c-di-GMP phosphodiesterase PdeA Neighboring gene tRNA-Ala

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transposase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA transposition IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transposition IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative IS186/IS421 transposase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2514331..2515443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416895.2 putative IS186/IS421 transposase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416895.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P11901
      Conserved Domains (1) summary
      NF033592
      Location:18 → 349
      transpos_IS4_1; IS4 family transposase
    Nucleotide Protein
    Heading Accession and Version

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