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    glcC DNA-binding transcriptional dual regulator GlcC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947466, updated on 3-Dec-2024

    Summary

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    Official Symbol
    glcC
    Official Full Name
    DNA-binding transcriptional dual regulator GlcC
    Primary source
    ECOCYC:G7546
    Locus tag
    b2980
    See related
    ASAP:ABE-0009777
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2975; yghN
    Summary
    GlcC is a GntR-type DNA-binding transcriptional regulator. [More information is available at EcoGene: EG12998].
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    Genomic context

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    Sequence:
    NC_000913.3 (3128272..3129036)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycolate dehydrogenase, putative FAD-binding subunit Neighboring gene glycolate dehydrogenase, putative FAD-linked subunit Neighboring gene putative DNA-binding transcriptional regulator YghO Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative transport protein YghQ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins. Miller ML, et al. Proteomics, 2009 Jan. PMID 19053140
    2. Cross-induction of glc and ace operons of Escherichia coli attributable to pathway intersection. Characterization of the glc promoter. Pellicer MT, et al. J Biol Chem, 1999 Jan 15. PMID 9880556
    3. glc locus of Escherichia coli: characterization of genes encoding the subunits of glycolate oxidase and the glc regulator protein. Pellicer MT, et al. J Bacteriol, 1996 Apr. PMID 8606183, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. Rigali S, et al. J Biol Chem, 2002 Apr 12. PMID 11756427

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DNA-binding transcriptional dual regulator GlcC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3128272..3129036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417454.1 DNA-binding transcriptional dual regulator GlcC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417454.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1N0Q8
      Conserved Domains (1) summary
      PRK09990
      Location:1 → 250
      PRK09990; DNA-binding transcriptional regulator GlcC; Provisional
    Nucleotide Protein
    Heading Accession and Version

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