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    yihL putative DNA-binding transcriptional regulator YihL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948368, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yihL
    Official Full Name
    putative DNA-binding transcriptional regulator YihL
    Primary source
    ECOCYC:EG11838
    Locus tag
    b3872
    See related
    ASAP:ABE-0012651
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3865
    Summary
    The YihL putative transcriptional regulator belongs to the GntR family . [More information is available at EcoCyc: EG11838].
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    Genomic context

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    Sequence:
    NC_000913.3 (4060447..4061157)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutamine synthetase Neighboring gene 50S ribosomal subunit assembly factor BipA Neighboring gene putative TIM barrel domain-containing protein YihM Neighboring gene putative transporter YihN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of transcription factors and the gene regulatory network in Escherichia coli. Madan Babu M, et al. Nucleic Acids Res, 2003 Feb 15. PMID 12582243, Free PMC Article
    2. The Universal Protein Resource (UniProt). Bairoch A, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608167, Free PMC Article
    3. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    4. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    5. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YihL

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4060447..4061157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418308.1 putative DNA-binding transcriptional regulator YihL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418308.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7F8C3
      Conserved Domains (1) summary
      COG2188
      Location:12 → 236
      MngR; DNA-binding transcriptional regulator, GntR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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