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    ytfF inner membrane protein YtfF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948732, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ytfF
    Official Full Name
    inner membrane protein YtfF
    Primary source
    ECOCYC:G7867
    Locus tag
    b4210
    See related
    ASAP:ABE-0013769
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4206
    Summary
    YtfF belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG12506]. YtfF is an inner membrane protein with 10 predicted transmembrane helices. [More information is available at EcoCyc: G7867].
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    Genomic context

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    Sequence:
    NC_000913.3 (4432091..4433056, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-serine/alanine/glycine/:H(+)symporter Neighboring gene iron-sulfur cluster repair protein YtfE Neighboring gene NAD(P)H:quinone oxidoreductase Neighboring gene putative transcriptional regulator YtfH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    inner membrane protein YtfF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4432091..4433056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418631.2 inner membrane protein YtfF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418631.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EBI7
      Conserved Domains (1) summary
      COG0697
      Location:1 → 309
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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