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    ytjB putative inner membrane protein Smp [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946089, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ytjB
    Official Full Name
    putative inner membrane protein Smp
    Primary source
    ECOCYC:EG10951
    Locus tag
    b4387
    See related
    ASAP:ABE-0014387
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4379; smp
    Summary
    Smp is a membrane protein . [More information is available at EcoCyc: EG10951].
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    Genomic context

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    Sequence:
    NC_000913.3 (4624145..4624789, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene toxin YjjJ Neighboring gene lipoate--protein ligase A Neighboring gene phosphoserine phosphatase Neighboring gene DNA recombination protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. IS30 activation of an smp'-lacZ gene fusion in Escherichia coli. Neuwald AF, et al. FEMS Microbiol Lett, 1990 Mar 1. PMID 2158922
    2. Identification of the gene encoding lipoate-protein ligase A of Escherichia coli. Molecular cloning and characterization of the lplA gene and gene product. Morris TW, et al. J Biol Chem, 1994 Jun 10. PMID 8206909
    3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    4. An Escherichia coli membrane protein with a unique signal sequence. Neuwald AF, et al. Gene, 1989 Oct 30. PMID 2684780
    5. Lipoic acid metabolism in Escherichia coli: the lplA and lipB genes define redundant pathways for ligation of lipoyl groups to apoprotein. Morris TW, et al. J Bacteriol, 1995 Jan. PMID 8002607, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative inner membrane protein Smp

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4624145..4624789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418804.1 putative inner membrane protein Smp [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418804.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GK33
      Conserved Domains (1) summary
      PRK14061
      Location:1 → 214
      PRK14061; unknown domain/lipoate-protein ligase A fusion protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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